Instrumental Access 2017

Redeemer’s University: Department of Biological Sciences

  • High School students visiting ACEGID laboratories

  • A demonstration of sequencing in the lab

  • Second-year biology students in the lab

  • The ACEGID research laboratory

  • Students work on a practical session in the Department of Biological Sciences’ Research Laboratory

  • The Biological Sciences department staff

  • Redeemer’s University

Meet our Partner

Redeemer’s University is a young, private university located in southwestern Nigeria. Less than a decade after it was founded, the Department of Biological Sciences competed successfully for NIH and World Bank funding to establish the African Centre of Excellence for the Genomics of Infectious Diseases (ACEGID). ACEGID was instrumental in containing the 2014 Ebola outbreak in Nigeria.

The Department of Chemistry at Redeemer’s University is an Instrumental Access 2016 partner.

Areas of Research:

ACEGID focuses on diagnosis and containment of deadly diseases such as Ebola, malaria, and Lassa fever in West Africa. Other faculty research at the university focuses on the environmental impact of naturally-occurring oil seepages (common in parts of Nigeria), investigating disease resistance genes in poultry, indoor air quality in hospitals, and development of antimicrobials from local plants.

Using Genomics to Improve Diagnosis of Infectious Disease: Dr. Onikepe Folarin

Dr Onikepe FolarinTo say that malaria is a huge problem in Nigeria is to dramatically understate its devastating impact.

Nigeria alone accounts for 23% of malaria cases worldwide and a third of all malaria deaths. A staggering 60% of outpatient visits and 30% of hospitalizations are for malaria.

In the face of these grim realities, it is easy to understand why an overwhelmed Nigerian clinician would conclude that a patient presenting with malaria-like symptoms (the most important of which is a distinctive pattern of fever) is probably suffering from malaria and treat that patient accordingly.

Onikepe Folarin, PhD, a senior lecturer at RUN and deputy director of ACEGID, believes that this automatic presumption is a mistake that leads to misdiagnosis in some patients. Malaria may be the most common illness characterized by fever in Nigeria, but it isn’t the only one.

Using the powerful tools of modern genomics, Dr. Folarin is seeking to understand the broader landscape of infectious disease with the goal of broadening routine diagnostic procedures to provide clinicians with better information with which to manage disease.

“The knowledge gained will form the basis for improved routine diagnosis rather than presumptive diagnosis based on fever,” Dr. Folarin explains. “This will greatly contribute to the reduction in the morbidity and mortality of infectious diseases through proper management, prevention of undue exposure to drugs, prevention of emergence of drug resistance, efficient control of the disease since most are infectious, and preparedness for emergence or re-emergence of outbreak of disease.”

Getting the diagnosis right the first time, and avoiding unnecessary death and disability, also has enormous potential to boost economic productivity and development. Farmers, for example, could return to their fields, improving food security.

Progress on the project so far includes the isolation and identification of various pathogens from blood samples of patients presenting with fever. These include the malaria parasites and typhoid bacteria, and surprisingly, the flaviviruses responsible for chikungunya and dengue. These viruses were not previously known to be circulating in Nigeria.

The next phase of the research project is to use microbiological and genomics tools to identify and characterize other possible microbes that may be causing fever.

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